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Masatoshi Nei

Evan Pugh Professor of Biology and Director of the Institute of Molecular Evolutionary Genetics

Office: 328 Mueller
Phone: 863-7334
Contact: Masatoshi Nei
Masatoshi Nei

Education

  • Ph.D., Kyoto University, Kyoto Japan, 1959
  • M.S., Kyoto University, Kyoto Japan, 1955
  • B.S., Miyazaki University, Miyazaki Japan, 1953

Postdoc Training

  • North Carolina State University, Raleigh, 1960-61
  • University of California, Davis

Honors and Awards

  • Barbara Bowman Award, Texas Genetics Society, 2003
  • International Prize for Biology, Japan Society of Promotion of Science, 2002
  • Member, National Academy of Sciences, USA, 1997
  • Elected Fellow, American Academy of Arts and Sciences, 1990
  • Honorary Member, Japan Society of Human Genetics, 1991
  • Kihara Prize, Genetics Society of Japan, 1990
  • Honorary Member, Genetics Society of Japan, 1989
  • Japan Society of Human Genetics Award, 1977

Research Interests

Molecular and genomic evolution

Molecular and genomic evolution

Statistical methods for studying molecular evolutionary genetics
Various statistical methods are required to analyze and interpret data on molecular evolution. One of my research projects focuses on developing such methods. We are working on methods for inferring phylogenetic trees from various molecular data and estimating the number of nucleotide or amino acid substitutions between different sequences. We are also studying statistical methods for interning the extent of functional differentiation of duplicate genes.

Evolutionary studies of Genomic sequence data
Genomic sequence data provide important information on the evolution of genes and phenotypic characters. Currently we are studying the molecular basis of evolution of morphological and physiological characters such as olfaction and other sensory systems in  vertebrates and flower development in plants. Our approach is to compile genomic gene sequences from various model organisms and to study how the DNA sequences, number of genes involved and the interaction of component multigene families has changed in the evolutionary process. The genetic systems we are studying now include the sensory systems and immune systems  in vertebrates and the flowering system (MADS-box genes) in plants.

Human evolution at the molecular level
To understand the process and pattern of human evolution, we are studying the genetic relationships of various human populations at the molecular level. For this purpose, we have collected allele frequency data for a large number of electrophoretic, immunological, and DNA marker loci. Using these data and statistical methods we developed, we are trying to reconstruct the evolutionary history of human populations.

Selected Publications

Nei, M (2005) Selectionism and neutralism in molecular evolution. Mol. Biol. Evol. 22:2318-2342.
Nam, J. and M. Nei (2005) Evolutionary change of the numbers of homeobox genes in bilateral animals. Mol. Biol. Evol. 22:2386-2394.
Nei, M. and A. P. Rooney (2005) Concerted and birth-and-death evolution of multigene families. Annu. Rev. Genet. 39:121-152.
Niimura, Y. and M. Nei (2005) Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods. Proc. Natl. Acad. Sci. USA, 102:6039-6044.
Tamura, K., M. Nei, and S. Kumar (2004) Prospects for inferring very large phylogenies using the neighbor-joining method.  Proc. Natl. Acad. Sci. USA 101:11030-11035
Nam, J., C. W. dePamphilis, H. Ma, and M. Nei (2003) Antiquity and evolution of the MADS-box gene family controlling flower development in plants. Mol. Biol. Evol. 20:1435-1447.

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